BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F03SP1|AL426065
(831 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1786 1624 0.0
>3x_Contig1786
Length = 33838
Score = 1624 bits (819), Expect = 0.0
Identities = 829/831 (99%), Gaps = 1/831 (0%)
Strand = Plus / Minus
Query: 1 agatccagaaacacctttcgccgagaagtttccccggaataccatacttctgtatcaatt 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29221 agatccagaaacacctt-cgccgagaagtttccccggaataccatacttctgtatcaatt 29163
Query: 61 catgggcgtcttctgcgtcgtataaagtcaattttgtagttttacggtctgtaacgactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29162 catgggcgtcttctgcgtcgtataaagtcaattttgtagttttacggtctgtaacgactg 29103
Query: 121 cggttgctgtcggttgtttttgttctacatgtttttgctctccggattgttcgtggagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29102 cggttgctgtcggttgtttttgttctacatgtttttgctctccggattgttcgtggagct 29043
Query: 181 taaagaaccgtttcaaacggagtaatttcttgtgatggggttttggatgggaattatcgg 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 29042 taaagaaccgtttcaaacggagtgatttcttgtgatggggttttggatgggaattatcgg 28983
Query: 241 ccgatgataatttagggggtggttgcagcttaaattgttcgatttgtctctgaagatact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28982 ccgatgataatttagggggtggttgcagcttaaattgttcgatttgtctctgaagatact 28923
Query: 301 ctgcaggatgctggttcggctgaggtgaggtatccaatgttacagttgaatgctgtacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28922 ctgcaggatgctggttcggctgaggtgaggtatccaatgttacagttgaatgctgtacct 28863
Query: 361 ttaatgatggtttgttatgttcatgtgacgtatgattgtgcaataatggatgtgattgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28862 ttaatgatggtttgttatgttcatgtgacgtatgattgtgcaataatggatgtgattgtg 28803
Query: 421 tatttgaaaggcctgatacagagttggaatgtgaattctgtgtaaccggtgagcttgata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28802 tatttgaaaggcctgatacagagttggaatgtgaattctgtgtaaccggtgagcttgata 28743
Query: 481 ctgaattggaatttgaaaagcttctttgcttgttatccttcggatgaggtgttcgcgtct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28742 ctgaattggaatttgaaaagcttctttgcttgttatccttcggatgaggtgttcgcgtct 28683
Query: 541 gcgaactgccattagcctgataattgttcggattatgcaagtgatttgtatgctttaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28682 gcgaactgccattagcctgataattgttcggattatgcaagtgatttgtatgctttaaag 28623
Query: 601 tctgaagtcctggtggaagatcgccggaaatttgtggagaaacccgggtatcagtattgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28622 tctgaagtcctggtggaagatcgccggaaatttgtggagaaacccgggtatcagtattgt 28563
Query: 661 ggctgccttcactgccactatcatttccgttgcttccgttaccgttagcattgcggaaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28562 ggctgccttcactgccactatcatttccgttgcttccgttaccgttagcattgcggaaga 28503
Query: 721 atcgtccaagtgctagccttgatttattcttgatggagctcttggaaaagaacgtacctg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28502 atcgtccaagtgctagccttgatttattcttgatggagctcttggaaaagaacgtacctg 28443
Query: 781 cagaacttgcagattttacggattgaatctcgtgactggactccgcactca 831
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28442 cagaacttgcagattttacggattgaatctcgtgactggactccgcactca 28392
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5097
Number of Sequences: 1807
Number of extensions: 5097
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 831
length of database: 10,358,551
effective HSP length: 16
effective length of query: 815
effective length of database: 10,329,639
effective search space: 8418655785
effective search space used: 8418655785
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)